2017
Alexander MM, Mohr JP, DeBlasio SL, Chavez JD, Ziegler-Graff V, Brault V, Bruce JE, Heck M (2017) Insights in luteovirid structural biology guided by chemical cross-linking and high resolution mass spectrometry. Virus Research doi.org/10.1016/j.virusres.2017.05.005 http://www.sciencedirect.com/science/article/pii/S0168170216308401?via%3Dihub
Becker, L., Bellow, S., Carré, Latouche, Poutaraud, A., Merdinoglu, D., Brown, S. C., Cerovic, Chaimbault (2017). Correlative Analysis of Fluorescent Phytoalexins by Mass Spectrometry Imaging and Fluorescence Microscopy in Grapevine Leaves. Analytical Chemistry, 89 (13), 7099-7106. , DOI : 10.1021/acs.analchem.7b01002 https://pubs.acs.org/doi/10.1021/acs.analchem.7b01002
Boissinot S, Pichon E, Sorin C, Piccini C, Scheidecker D, Ziegler-Graff V, Brault V (2017) Systemic propagation of a fluorescent infectious clone of a polerovirus following inoculation by agrobacteria and aphids. Viruses 9(7), 166. DOI:10.3390/v9070166 http://www.mdpi.com/1999-4915/9/7/166
Candresse, T., Faure, C., Theil, S., Beuve, M., Lemaire, O., Spilmont, M., Marais, A. (2017). First Report of Grapevine asteroid mosaic-associated virus Infecting Grapevine (Vitis vinifera) in France. Plant Disease, 101 (6), 1061. DOI : 10.1094/PDIS-01-17-0012-PDN http://apsjournals.apsnet.org/doi/10.1094/PDIS-01-17-0012-PDN
Duchêne E, Butterlin G, Claudel P, Dumas V, Jaegli N, Hugueney P, Arnold G, Merdinoglu D (2017) Genetic determinism of the'Muscat' flavour in grapevine (Vitis vinifera L.) cultivars. Acta Horticulturae, 1157, 87-92. DOI : 10.17660/ActaHortic.2017.1157.14 http://www.actahort.org/books/1157/1157_14.htm
DuchêneE, Dumas V, Jaegli N, Merdinoglu D, Dai Z (2017) Deciphering the genetic variability of berry sugar content in grapevine cultivars. Acta Horticulturae, 1157, 83-86. DOI : 10.17660/ActaHortic.2017.1157.13
Ilc T, Halter D, Miesch L, Lauvoisard F, Kriegshauser L, Ilg A, Baltenweck R, Hugueney P, Werck-Reichhart D, Duchêne E, Navrot N (2017) Wine aroma: A cytochrome P450 generates the precursor of the key odorant wine lactone in grape. New Phytologist, 213, 264-27. DOI: 10.1111/nph.14139 https://nph.onlinelibrary.wiley.com/doi/abs/10.1111/nph.14139
García de Cortázar-Atauri I, Duchêne E, Destrac-Irvine A, Barbeau G, de Rességuier L, Lacombe T, Parker AK, Saurin N, van Leeuwen C (2017) Grapevine phenology in France: from past observations to future evolutions in the context of climate change. Oeno-one, 51, 115-126. DOI : 10.20870/oeno-one.2016.0.0.1622 http://oeno-one.eu/article/view/1622
Mestre P, Arista G, Piron MC, Rustenholz C, Ritzenthaler C, Merdinoglu D, Chich JF (2017)Identification of a Vitis vinifera endo ß-1, 3 glucanase with antimicrobial activity against Plasmopara viticola. Molecular Plant Pathology, 18(5):708-719. DOI : 10.1111/mpp.12431. https://bsppjournals.onlinelibrary.wiley.com/doi/abs/10.1111/mpp.12431
Moneyron A, LMC, Westhalten group, Lallemand JF, Schmitt C, Perrin M, Soustre-Gacougnolle I, Masson JE (2017) Linking the knowledge and reasoning of dissenting actors fosters a bottom-up design of agroecological viticulture Agronomy for Sustainable Development 37 :41. doi.org/10.1007/s13593-017-0449-3 https://link.springer.com/article/10.1007/s13593-017-0449-3
Sofer L, Cabanillas D, Gayral M, Téplier R, Pouzoulet J, Ducousso M, Dufin L, Bréhélin C, Ziegler-Graff V, Brault V, Revers F (2017) New insights in the identification of host factors potentially involved in potyvirus long distance movement. Arch Virol. 162(7):1855-1865. DOI : 10.1007/s00705-017-3292-6. https://link.springer.com/article/10.1007%2Fs00705-017-3292-6
Vivin P, Lebon É, Dai Z, Duchêne E, Marguerit E, García de Cortázar-Atauri I, Zhu J, Simonneau T, van Leeuwen C, Delrot S, Ollat N (2017) Combining ecophysiological models and genetic analysis: a promising way to dissect complex adaptive traits in grapevine. Oeno-one, 51, 181-189. DOI : 10.20870/oeno-one.2016.0.0.1588 http://oeno-one.eu/article/view/1588
Yvon M, Vile D, Brault V, Blanc S, Van Munster M. (2017) Drought reduces transmission of Turnip yellows virus, an insect-vectored circulative virus. Virus Research doi.org/10.1016/j.virusres.2017.07.009 https://www.sciencedirect.com/science/article/pii/S0168170217301156
Chapitres d'ouvrage
Herrbach É., Alliaume A., Prator C.A., Daane K.M., Cooper M.L., Almeida R.P.P., (2017). Vector transmission of grapevine-leafroll associated viruses. In Meng B.Z., Martelli G.P., Fuchs M., Golino D. (Eds), Grapevine Viruses: Molecular Biology, Diagnostics and Management, Springer International Publishing AG, pp. 483-503.
Andret-Link, P., Marmonier, A., Belval, L., Hleibieh, K., Ritzenthaler, C. and Demangeat, G. (2017). Nematode vectors for grapevine viruses: biology, behavior and mechanisms of virus transmission. In Grapevine Viruses: Molecular Biology, Diagnostics and Management (Meng, B., Martelli, G.P., Fuchs, M. and Golino, D. eds), pp. 505–529. Switzerland: Springer International Publishing AG.
Fuchs, M. and Lemaire, O. (2017). Novel approaches for virus disease management. In: Grapevine Viruses: Molecular Biology, Diagnostics and Management. Meng, B., Martelli, G.P., Golino, D.A. and Fuchs, M.F (eds). Springer Verlag, pp. 599-621.
Fuchs, M. Schmitt-Keichinger, C. and Sanfaçon, H. (2017). A renaissance in nepovirus research provides new insights into their molecular interface with hosts and vectors. In: Advances in Virus Research, M. Kielian, K. Maramorosch, T.C Mettenleiter and M.J Roosinck (eds.).pp. 61-105.
2018
Akaberi S, Wang H, Claudel P, Riemann M, Hause B, Hugueney P, Nick P. (2018) Grapevine fatty acid hydroperoxide lyase generates actin-disrupting volatiles and promotes defence-related cell death. Journal of Experimental Botany, 69:2883-2896, DOI
Alliaume A, Reinbold C, Uzest M, Lemaire O, Herrbach E (2018). Mouthparts morphology of the mealybug Phenacoccus aceris (Signoret) (Hemiptera: Pseudococcidae). Bulletin of Insectology ,71 (1) DOI
Alliaume A, Reinbold C, Erhardt M, Beuve M, Hily J-M, Lemaire O, Herrbach E (2018) Virus preparation from the mixed-infected P70 Pinot Noir accession exhibits GLRaV-1 /GVA 'end-to-end' particles. Archives of Virology, 163:3149-3154, DOI
Bastet A, Lederer B, Giovinazzo N, Arnoux X, German-Retana S, Reinbold C, Brault V, Garcia D, Djennane S, Gersch S, Lemaire O, Robaglia C, Gallois J-L (2018) Trans-species synthetic gene design allows resistance pyramiding and broad-spectrum engineering of virus resistance in plants. Plant Biotechnol. J., 1-13, DOI
Beuve M, Hily J-M, Alliaume A, Reinbold C, Le Maguet J, Candresse T, Herrbach E , Lemaire O (2018) A complex virome unveiled by deep sequencing analysis of RNAs from a French Pinot noir grapevine exhibiting strong leafroll symptoms. Archives of Virology, 163:2937–2946, DOI
Bortolamiol-Bécet D, Monsion B, Chapuis S, Hleibieh K, ScheideckerD, Alioua A, Bogaert F, Revers F, Brault V, Ziegler-Graff V (2018) Phloem-Triggered Virus-Induced Gene Silencing Using a Recombinant Polerovirus. Front. Microbiol. DOI
Claudel P, Chesnais Q, Fouché Q, Krieger C, Halter D, Bogaert F, Meyer S, Boissinot S, Hugueney P, Ziegler-Graff V, Ameline A, Brault V (2018) The aphid-transmitted turnip yellows virus differentially affects volatiles emission and subsequent vector behavior in two Brassicaceae plants. International Journal of Molecular Science, 19:2316, DOI
Delame M, Prado E, Blanc S, Robert‑Siegwald G, Schneider C, Mestre P, Rustenholz C, Merdinoglu D (2018) Introgression reshapes recombination distribution in grapevine interspecific hybrids. Theoretical and Applied Genetics, 1-15, DOI
Gourguillon L, Rustenholz C, Lobstein A, Gondet L (2018) Callus induction and establishment of cell suspension cultures of the halophyte Armeria maritima (Mill.) Willd. Sci Hortic (Amsterdam). DOI
Heck M, Brault V (2018) Targeted disruption of aphid transmission: a vision for the management of crop diseases caused by Luteoviridae members. Current Opinion in Virology, 33:24-32; DOI
Hemmer C, Djennane S, Ackerer L, Hleibieh K, Marmonier A, Gersch S ; Garcia S , Vigne E, Komar V, Perrin M , Gertz C, , Belval L, Berthold F, Monsion B, Schmitt-Keichinger C, Lemaire O, Lorber B, Gutiérrez C, Muyldermans S, Demangeat G, Ritzenthaler C (2018) Nanobody-mediated resistance to Grapevine fanleaf virus in plants. Plant Biotechnology Journal, 16:660-671, DOI
Hily J-M, Demanèche S, Poulicard N, Tannières M, Djennane S, Beuve M, Vigne E, Demangeat G, Komar V, Gertz C, Marmonier A, Hemmer C, Vigneron S, Marais A, Candresse T, Simonet P, Lemaire O (2018) Metagenomic-based impact study of transgenic grapevine rootstock on its associated virome and soil bacteriome. Plant Biotechnology Journal, 16:208-220, DOI
Hily J-M, Beuve M, Vigne E, Demangeat G, Candresse T, Lemaire O (2018) A genome-wide diversity study of Grapevine rupestris stem pitting-associated virus. Archives of Virology, 163:3105–3111, DOI
Hily J-M, Candresse T, Garcia S, Vigne E,Tannière M, Komar V, Barnabé G, Alliaume A, Gilg S, Hommay G, Beuve M, Marais A, Lemaire O. High-throughput sequencing and the viromic study of grapevine leaves: from the detection of grapevine-infecting viruses to the description of a new environmental Tymovirales member. Frontiers In Microbiology , 29 August 2018, DOI
Ilc T, Arista G, Tavares R, Navrot N, Duchêne E, Velt A, Choulet F, Paux E, Fischer M, Nelson D, Hugueney P, Werck-Reichhart D and Rustenholtz C (2018) Annotation, classification, genomic organization and expression of the Vitis vinifera CYPome. PLoS ONE 13(6): e0199902 DOI
Koutouan C, Clerc VL, Baltenweck R, Claudel P, Halter D, Hugueney P, Hamama L, Suel A, Huet S, Merlet M-HB, Briard M (2018) Link between carrot leaf secondary metabolites and resistance to Alternaria dauci. Scientific Reports, 8:13746, DOI
Martin I, Vigne E, Berthold F, Komar V, Lemaire O, Fuchs M, Schmitt-Keichinger C (2018) The fifty distal amino acids of the 2AHP homing protein of grapevine fanleaf virus elicit a hypersensitive reaction on Nicotiana occidentalis. Molecular Plant Pathology 1 9(3 ), 731–74 3 DOI
Merdinoglu D, Schneider C, Prado E, Wiedemann-Merdinoglu S, Mestre P (2018) Breeding for durable resistance to downy and powdery mildew in grapevine. OENO one 52(3) , DOI
Mulot M, Monsion B, Boissinot S, Rastegar M, Meyer S, Bochet N and Brault V (2018) Transmission of Turnip yellows virus by Myzus persicae Is Reduced by Feeding Aphids on Double-Stranded RNA Targeting the Ephrin Receptor Protein. Front. Microbiol., 9:457, DOI
Negrel L, Halter D, Wiedemann-Merdinoglu S, Rustenholz C, Merdinoglu D, Hugueney P, Baltenweck R (2018) Identification of lipid markers of Plasmopara viticola infection in grapevine using a non-targeted metabolomic approach. Front. Plant Sci., 9:360, DOI
Nourinejhad Zarghani S, Hily JM, Glasa M, Marais A, Wetzel T, Faure C, Vigne E, Velt A, Lemaire O, Boursiquot JM, Okic A, Ruiz-Garcia AB, Olmos A, Lacombe T, Candresse T (2018) Grapevine virus T diversity as revealed by full-length genome sequences assembled from high-throughput sequence data. PLoS ONE 13, e0206010 DOI
Osterbaan LJ, Schmitt-Keichinger C, Vigne E, Fuchs M (2018) Optimal systemic grapevine fanleaf virus infection in Nicotiana benthamiana following agroinoculation. Journal of Virological Methods, 257:16-21, DOI
Plomion C, Aury JM, Amselem J, Leroy T, Murat F, Duplessis S, Faye S, Francillonne N, Labadie K, Le Provost G, Lesur I, Bartholomé B, Faivre-Rampant P, Kohler A, Leplé JC, Chantret N, Chen J, Diévart A, Alaeitabar T, Barbe V, Belser C, Bergès H, Bodénès C, Bogeat-Triboulot MB, Bouffaud ML, Brachi B, Chancerel E, Cohen D, Couloux A, Da Silva C, Dossat C, Ehrenmann F, Gaspin C, Grima-Pettenati J, Guichoux E, Hecker A, Herrmann S, Hugueney P, Hummel I, Klopp C, Lalanne C, Lascoux M, Lasserre E, Lemainque A, Desprez-Loustau ML, Luyten I, Madoui MA, Mangenot S, Marchal C, Maumus F, Mercier J, Michotey C, Panaud O, Picault N, Rouhier N, Rué O, Rustenholz C, Salin F, Soler M, Tarkka M, Velt A, Zanne A, Martin F, Wincker P, Quesneville H, Kremer A, Salse J (2018) Oak genome reveals facets of long lifespan. Nature Plants, 4:440-45, DOI
Poni S, Gatti M, Palliotti A, Dai Z, Duchêne E, Truong TT, Ferrara G, Matarrese AMS, Gallotta A, Bellincontro A, Mencarelli F, Tombesi, S. (2018) Grapevine quality: a multiple choice issue. Scientia Horticulturae, 234:445-462, DOI
Soustre-Gacougnolle I, Lollier M, Schmitt C, Perrin M, Buvens E, Lallemand J-F, Mermet M, Henaux M, Thibault-Carpentier C, Dembelé D, Steyer D, Clayeux C, Moneyron A, Masson E (2018) Responses to climatic and pathogen threats differ in biodynamic and conventional vines. Scientific Reports, 8: 16857, DOI
Vigne E, Garcia S, Komar V, Lemaire O, Hily J-M (2018) Comparison of Serological and Molecular Methods With High-Throughput Sequencing for the Detection and Quantification of Grapevine Fanleaf Virus in Vineyard Samples. Front. Microbiol., 22 November 2018, DOI
Wetzel V, Brault V, Varrelmann M (2018) Production of a Beet chlorosis virus full-length cDNA clone by means of Gibson assembly and analysis of biological properties. Journal of General Virology, 99: 1522-1527, DOI
Zhou JS, Drucker M, Ng JC (2018). Direct and indirect influences of virus-insect vector-plant interactions on non-circulative, semi-persistent virus transmission. Curr Opin Virol;33: 129–136, DOI
2019
Belval L, Marmonier A, Schmitt-Keichinger C, Gersch S, Andret-Link P, Komar V, Vigne E, Lemaire O, Ritzenthaler C, and Demangeat G (2019) From a Movement-Deficient Grapevine Fanleaf Virus to the Identification of a New Viral Determinant of Nematode Transmission. Viruses 11(12), 1146; https://doi.org/10.3390/v11121146
Berthelot E, Ducousso M, Macia J-L, Bogaert F, Baecker V, Thébaud G, Gallet R, Yvon M, Blanc S, Khelifa M, Drucker M (2019) Turnip mosaic virus is a second example of a virus using transmission activation for plant-to-plant propagation by aphids. Journal of Virology. https://doi.org/10.1128/JVI.01822-18
Berthelot E, Macia, J-L, Martinière A, Morisset A, Gallet R, Blanc S, Khelifa M, Drucker M (2019). Pharmacological analysis of transmission activation of two aphid-vectored plant viruses, turnip mosaic virus and cauliflower mosaic virus. Sci Rep 9, 9374. https://www.ncbi.nlm.nih.gov/pubmed/31253881
Berthold F, Roujol D, Hemmer C, Jamet E, Ritzenthaler C, Hoffmann L, Schmitt-Keichinger C (2019) Inside or outside? A new collection of Gateway vectors allowing plant protein subcellular localization or over-expression. Plasmid, 102436.
Chesnais Q, Couty A, Uzest M, Brault V, Ameline A (2019). Plant infection by two different viruses induce contrasting changes of vectors fitness and behavior. Insect Science. 2019;26: 86–96. doi:10.1111/1744-7917.12508
Chesnais Q, Mauck K, Bogaert F, Bamière A, Catterou M, Spicher F, Brault V, Tepfer M, Ameline A (2019) Virus effects on plant quality and vector behvior are species specific and do not depend on host physiological phenotype. Journal of Pest Science. https://doi.org/10.1007/s10340-019-01082-z
Combier M, Evangelisti E, Piron MC, Rengel D, Legrand L, Shenhav L, Bouchez O, Schornack S, Mestre P (2019) A secreted WY-domain-containing protein present in European isolates of the oomycete Plasmopara viticola induces cell death in grapevine and tobacco species. PLoS One. 2019 Jul 29;14(7):e0220184. doi: 10.1371/journal.pone.0220184.
Dàder B, Burckbuchler M, Macia JL, Alcon C, Curie C, Gargani D, Zhou JS, Ng JCK, Brault V, Drucker M (2019) Split green fluorescent protein as a tool to study infection with a plant pathogen, Cauliflower mosaic virus. PLoS One. https://doi.org/10.1371/journal.pone.0213087
De Badts, X., Dumas, V., Jaegli, N., Ley, L., Merdinoglu, D., and Duchêne, E. (2019). Integrating spatial variations in the vineyard to enhance quantitative trait locus (QTL) detection. Acta Horticulturae 1248, 215-220. DOI: 10.17660/ActaHortic.2019.1248.31
Delame M, Prado E, Blanc S, Robert‑Siegwald G, Schneider C, Mestre P, Rustenholz C, Merdinoglu D (2019) Introgression reshapes recombination distribution in grapevine interspecific hybrids. Theoretical and Applied Genetics. https://doi.org/10.1007/s00122-018-3260-x
Delbac L, Delière L, Schneider C, Delmotte F (2019) Evidence for sexual reproduction and fertile oospore production by Plasmopara viticola on the leaves of partially resistant grapevine cultivars. Acta Horticulturae, 1248, 607-619. DOI 10.17660/ActaHortic.2019.1248.8
Dupont C, Michiels A, Sochard C, Dardenne N, Meyer S, Brault V, Outreman Y, Sentis A (2019) Virus mediated trophic interactions between aphids and their natural enemies. Oikos. doi : 10.1111/oik.0686
Dussert Y, Mazet ID, Couture C, Gouzy J, Piron MC, Kuchly C, Bouchez O, Rispe C, Mestre P, Delmotte F. (2019) A high-quality grapevine downy mildew as-sembly reveals rapidly evolving and lineage-specific putative host adaptation genes. Genome Biology and Evolution 11: 964-969. doi: 10.1093/gbe/evz048
Foria S; Copetti D; Eisenmann B; Magris G; Vidotto M; Scalabrin S; Testolin R; Cipriani G; Wiedemann-Merdinoglu S; Bogs J; Di Gaspero G; Morgante M (2019) Gene duplication and transposition of mobile elements drive evolution of the Rpv3 resistance locus in grapevine. The Plant Journal. doi: 10.111/tpj.14551
Garcia S, Hily JM, Komar V, Gertz C, Demangeat G, Lemaire O, Vigne E (2019) Detection of Multiple Variants of Grapevine Fanleaf Virus in Single Xiphinema index Nematodes. Viruses, 11(12), 1139; https://doi.org/10.3390/v11121139
Hommay G, Wiss L, Chadoeuf J, Le Maguet J, Beuve M, Herrbach E (2019) Gone with the wind: Aerial dispersal of Parthenolecanium corni crawlers in a newly planted grapevine plot. Ann Appl Biol. 174 (3),372-387 https://doi.org/10.1111/aab.12505
Marmonier A, Perfus-Barbeoch L, Rancurel C, Boissinot S, Favery B, Demangeat G and Brault V (2019) In Vitro Acquisition of Specific Small Interfering RNAs Inhibits the Expression of Some Target Genes in the Plant Ectoparasite Xiphinema index. Int. J. Mol. Sci. 2019, 20(13), 3266; https://doi.org/10.3390/ijms20133266
Meteier E, La Camera S, Goddard ML, Laloue H, Mestre P, Chong J (2019) Overexpression of the VvSWEET4 trans-porter in grapevine hairy roots increases sugar transport and contents and enhances resistance to Pythium irregulare, a soil-borne pathogen. Front. Plant Sci., 09 July 2019 | https://doi.org/10.3389/fpls.2019.00884
Mignerot, L., Avia, K., Luthringer, R., Lipinska, A. P., Peters, A. F., Cock, J. M., & Coelho, S. M. (2019). A key role for sex chromosomes in the regulation of parthenogenesis in the brown alga Ectocarpus. PLoS genetics, 15(6), e1008211. https://doi.org/10.1371/journal.pgen.1008211
Osterbaan LJ, Choi J, Kenney J, Flasco M, Vigne E, Schmitt-Keichinger C, Rebelo AR, Cilia M, Fuchs M (2019) The identity of a single residue of the RNA-dependent RNA polymerase of Grapevine fanleaf virus modulates vein clearing symptoms in Nicotiana benthamiana. Molecular Plant-Microbe Interactions. doi: 10.1094/MPMI-12-18-0337-R
Pommier, C., Michotey, C., Cornut, G., Roumet, P., Duchêne, E., Flores, R., Lebreton, A., Alaux, M., Durand, S., Kimmel, E., Letellier, T., Merceron, G., Lainé, M., Guerche, C., Loaec, M., Steinbach, D., Laporte, M.-A., Arnaud, E., Quesneville, H., and Adam-Blondon, A.-F. (2019). Applying FAIR principles to plant phenotypic data management in GnpIS. Plant Phenomics 2019, 1-15 DOI: 10.34133/2019/1671403
Schmitt-Keichinger C (2019) Manipulating cellular factors to combat viruses: A case study from the plant eukaryotic translation initiation factors eIF4. Front. Microbiol. 10. doi: 10.3389/fmicb.2019.00017
Schneider C, Spring JL, Onimus C, Prado E, Verdenal T, Lemarquis G, Lorenzini F, Ley L, Duruz P, Gindro K et Merdinoglu D (2019) French-Swiss collaborative program for breeding new grapevine varieties durably resistant to downy and powdery mildew. BIO Web of conferences, 15, 01018. https://doi.org/10.1051/bioconf/20191501018
Schneider C, Onimus C, Prado E, Dumas V, Wiedemann-Merdinoglu S, Dorne MA, Lacombe MC, Piron MC, Umar-Faruk A, Duchêne E, Mestre P and Merdinoglu D (2019) INRA-ResDur: the French grapevine breeding programme for durable resistance to downy and powdery mildew. Acta Horticulturae, 1248, 207-213. DOI 10.17660/ActaHortic.2019.1248.30
Van Leeuwen, K., Destrac-Irvine, A., Dubernet, M., Duchêne, E., Gowdy, M., Marguerit, E., Pieri, P., Parker, A., de Rességuier, L., and Ollat, N. (2019) An Update on the Impact of Climate Change in Viticulture and Potential Adaptations. Agronomy 9. DOI: 10.3390/agronomy9090514
Vuosku, J., Muilu-Mäkelä, R., Avia, K., Suokas, M., Kestilä, J., Läärä, E., Häggman, H., Savolainen, O., & Sarjala, T. (2019). Thermospermine Synthase (ACL5) and Diamine Oxidase (DAO) Expression Is Needed for Zygotic Embryogenesis and Vascular Development in Scots Pine. Frontiers in Plant Science, 10, 1600. https://doi.org/10.3389/fpls.2019.01600
2020
Badouin H, Velt A, Gindraud F, Flutre T, Dumas V, Vautrin S, Marande W, Corbi J, Sallet E, Ganofsky J, Santoni S, Guyot D, Ricciardelli E, Jepsen K, Kafer J, Berges H, Duchêne E, Picard F, Hugueney P, Tavares R, Bacilieri R, Rustenholz C & Marais GAB (2020). The wild grape genome sequence provides insights into the transition from dioecy to hermaphroditism during grape domestication. Genome Biology. DOI
Baudry, L., Guiglielmoni, N., Marie-Nelly, H., Cormier, A., Marbouty, M., Avia, K., Mie, Y. L., Godfroy, O., Sterck, L., Cock, J. M., Zimmer, C., Coelho, S. M., & Koszul, R. (2020). instaGRAAL: chromosome-level quality scaffolding of genomes using a proximity ligation-based scaffolder. Genome biology, 21(1), 148. https://doi.org/10.1186/s13059-020-02041-z
Bogaert F, Marmonier A, Pichon E, Boissinot S, Ziegler-Graff V, Chesnais Q, Villeroy C, Drucker M, Brault V (2020) Impact of mutations in Arabidopsis thaliana metabolic pathways on polerovirus accumulation, aphid performance and feeding behavior. Viruses 12, 146. DOI
Chesnais Q, Caballero Vidal G, Coquelle R, Yvon M, Mauck K, Brault V, & Ameline A (2020). Post-acquisition effects of viruses on vector behavior are important components of manipulation strategies. Oecologia 194,429-440. DOI
Dittami SM, Corre E, Brillet-Guéguen L, Lipinska AP, Pontoizeau N, Aite M, Avia K, Caron C, Cho CH, Collén J, Cormier A, Delage L, Doubleau S, Frioux C, Gobet A, González-Navarrete I, Groisillier A, Hervé C, Jollivet D, KleinJan H, Leblanc C, Liu X, Marie D, Markov GV, Minoche AE, Monsoor M, Pericard P, Perrineau MM, Peters AF, Siegel A, Siméon A, Trottier C, Yoon HS, Himmelbauer H, Boyen C, Tonon T (2020). The genome of Ectocarpus subulatus - A highly stress-tolerant brown alga. Mar Genomics 52:100740. DOI
Duchêne E, Dumas V, Butterlin G, Jaegli N, Rustenholz C, Chauveau A, Bérard A, Le Paslier MC, Gaillard I, Merdinoglu D (2020). Genetic variations of acidity in grape berries are controlled by the interplay between organic acids and potassium. Theoretical and Applied Genetics. DOI
Dumas, V., Saurin, N., Destrac-Irvine, A., Dedet, S., Veyret, M., Marchal, C., Ojeda, H., Van Leeuwen, C., and Duchêne, E. (2020). Influence of grape juice extraction methods on basic analytical parameters. Vitis 59, 77-83. DOI
Dussert Y, Legrand L, Mazet ID, Couture C, Piron MC, Serre RF, Bouchez O, Mestre P, Toffolatti SL, Giraud T, Delmotte F (2020) Identification of the first oomycete mating-type locus in the grapevine downy mildew pathogen, Plasmopara viticola. Current Biology DOI
Hily JM, Poulicard N, Candresse T, Vigne E, Beuve M, Renault L, Velt A, Spilmont AS, Lemaire O (2020) Datamining, Genetic Diversity Analyses, and Phylogeo-graphic Reconstructions Redefine the Worldwide Evolutionary History of Grapevine Pinot gris virus and Grapevine berry inner necrosis virus. Phytobiomes Journal DOI
Hommay G, Wiss L, Reinbold C, Chadoeuf J and Herrbach E (2020) Spatial Distribution Patterns of Parthenolecanium corni (Hemiptera, Coccidae) and of the Ampelovirus GLRaV-1 and the Vitivirus GVA in a Commercial Vineyard, Viruses, 12(12), 1447 - 16 Dec 2020 DOI
Incarbone M, Scheer H, Hily JM, Kuhn L, Erhardt M, Dunoyer P, Altenbach D and Ritzenthaler C. (2020) Characterization of a DCL2-Insensitive Tomato Bushy Stunt Virus Infecting Arabidopsis thaliana. Viruses, 12, 1121. DOI
Khattab IM, Sahi VP, Baltenweck R, Maia-Grondard A, Hugueney P, Bieler E, Dürrenberger M, Riemann M, Nick P (2020). Ancestral chemotypes of cultivated grapevine with resistance to Botryosphaeriaceae-related dieback allocate metabolism towards bioactive stilbenes. New Phytol. DOI
Koschmieder J, Wüst F, Schaub P, Álvarez D, Trautmann D, Krischke M, Rustenholz C, Mano J, Mueller MJ, Bartels D, Hugueney P, Beyer P, Welsch R (2020) Plant apocarotenoid metabolism utilizes defense mechanisms against reactive carbonyl species and xenobiotics. Plant Physiology, kiaa033, https://doi.org/10.1093/plphys/kiaa033
MacWilliams JR, Dingwall S, Chesnais Q, Sugioand A and Kaloshian I (2020). AcDCXR Is a Cowpea Aphid Effector With Putative Roles in Altering Host Immunity and Physiology. Frontiers in Plant Science DOI
Mauck KE, Chesnais Q (2020). A synthesis of virus-vector associations reveals important deficiencies in studies on host and vector manipulation by plant viruses. Virus Research. DOI
Orlov I, Hemmer C, Ackerer L, Lorber B, Ghannam A, Poignavent V, Hleibieh K, Sauter C, Schmitt-Keichinger C, Belval L, Hily JM, Marmonier A, Komar V, Gersch S, Schellenberger P, Bron P, Vigne E, Muyldermans S, Lemaire O, Demangeat G, Ritzenthaler C, and Klaholz B (2020) Structural basis of nanobody recognition of grapevine feanleaf virus and of virus resistance loss. PNAS. DOI
Mulot M, Boissinot S, Brault V (2020). La transmission par arthropodes des virus de plantes et de vertébrés. Virologie 2020, 24 (3) : 177-92. DOI
Sun P, Dégut C, Réty S, Caissard JC, Hibrand-Saint Oyant L, Bony A, Paramita SN, Conart C, Magnard JL, Jeauffre J, Abd-El-Haliem AM, Marie-Magdelaine J, Thouroude T, Baltenweck R, Tisné C, Foucher F, Haring M, Hugueney P, Schuurink RC, Baudino S. (2020) Functional diversification in the Nudix hydrolase gene family drives sesquiterpene biosynthesis in Rosa x wichurana. Plant J. DOI
Toda, N; Rustenholz, C; Baud, A; Le Paslier, MC; Amselem, J; Merdinoglu, D; Faivre-Rampant (2020) NLGenomeSweeper: A Tool for Genome-Wide NBS-LRR Resistance Gene Identification. Genes, 11, 333 ; DOI
Chapitres d'ouvrages
Baudino S, Hugueney P, Caissard JC. 2020. Evolution of Scent Genes. In: Pichersky E, Dudareva N, eds. Biology of Plant Volatiles 2nd Edition. CRC Press, Taylor & Francis group, 217-234. DOI
Boissinot S., Brault V., Herrbach E. (2020). Luteovirids. Encyclopedia of Life Sciences 1 (2), 327-339. John Wiley & Sons Ltd., Chichester, UK. DOI
Herrbach E, Chesnais Q. (2020). Vector Transmission of Plant Viruses. In Fauquet C. (Ed.), Plant and Invertebrate Viruses, vol. 3, in Balford D., Zuckerman M. (Eds), Encyclopedia of Virology, 4th ed., Reference Module in Life Sciences, Elsevier, 10 p. DOI
Delrot, S., Grimplet, J., Carbonell-Bejerano, P., Schwandner, A., Bert, P.-F., Bavaresco, L., Costa, L.D., Di Gaspero, G., Duchêne, E., Hausmann, L., Malnoy, M., Morgante, M., Ollat, N., Pecile, M., and Vezzulli, S. (2020). "Genetic and Genomic Approaches for Adaptation of Grapevine to Climate Change," in Genomic Designing of Climate-Smart Fruit Crops, ed. C. Kole. (Cham: Springer International Publishing), 157-270.
2021
Clavel M., Lechner E., Incarbone M., Vincent T., Cognat V., Smirnova E., Lecorbeiller M., Brault V., Ziegler-Graff V., Genschik P. (2021) Atypical molecular features of RNA silencing against the phloem-restricted polerovirus TuYV. Nucleic Acids Res.; 49(19): 11274–11293. Published online 2021 Oct 6. doi: 10.1093/nar/gkab802
de Borba MC, Velho AC, Maia-Grondard A, Baltenweck R, Magnin-Robert M, Randoux B, Holvoet M, Hilbert J-L, Flahaut C, Reignault P, Hugueney P, Stadnik MJ and Siah A. (2021) The algal polysaccharide ulvan induces resistance in wheat against Zymoseptoria tritici without major alteration of leaf metabolome. Front. Plant Sci. 12: 703712. https://doi.org/10.3389/fpls.2021.703712
Burstin J., Avia K., Carillo‐Perdomo E., Lecomte C., Beji S., Hanocq E., Aubert G., Tayeh N., Klein A., Geffroy V., Le Signor C., Pflieger S., Dalmais M., Desgroux A., Lavaud C., Quillévéré‐Hamard A., Kreplak J., Lejeune‐Hénaut I., Bourion V., Pilet-Nayel M.-L., Leveugle M., Pinochet X., Thompson R. (2021-05-20). PeaMUST (Pea MultiStress Tolerance), a multidisciplinary French project uniting researchers, plant breeders, and the food industry. Legume Science, https://dx.doi.org/10.1002/leg3.108, https://hal.inrae.fr/hal-03280033
Quentin Chesnais, Maxime Verdier, Myriam Burckbuchler, Veronique Brault, Mikhail Pooggin, Martin Drucker (2021). Cauliflower mosaic virus protein P6-TAV plays a major role in alteration of aphid vector feeding behavior but not performance on infected Arabidopsis. Molecular Plant Pathology, Volume 22, Issue 8 p. 911-920. https://doi.org/10.1111/mpp.13069
Gomes E, Maillot P, Duchene E. Molecular tools for adapting viticulture to climate change. Front. Plant Sci., 10 February 2021 | https://doi.org/10.3389/fpls.2021.633846
Djennane S., Prado, E., Dumas, V., Demangeat, G., Gersch, S., Alais, A., Gertz, C., Beuve, M., Lemaire, O., Merdinoglu, D. (2021). A single resistance factor to solve vineyard degeneration due to grapevine fanleaf virus. Communications Biology, 4: 637 https://doi.org/10.1038/s42003-021-02164-4
Djennane S., Prado E., Dumas V., Demangeat G., Gersch S., Alais A., Gertz C., Beuve M., Lemaire O., Merdinoglu D (2021). Découverte d’une résistance naturelle au virus du court-noué chez le Riesling : un espoir pour la viticulture. Revue Française d'Œnologie, 306 : 19-29
Hily, J.-M., Komar, V., Mathieu, G., Mustin, P., Spilmont, A.-S., Uriel, G., Vigne, E., and Lemaire, O. (2021). First report of Grapevine enamovirus 1 in Vitis vinifera cultivar ‘Meunier’ in France. Plant Disease 0, null. DOI : 10.1094/pdis-07-21-1416-pdn
Hily J-M, Komar V, Poulicard N, Vigne E, Jacquet O, Protet N, Spilmont A-S and Lemaire O. (2021) Biological evidence and molecular modeling of a grapevine Pinot gris virus outbreak in a vineyard. Phytobiomes Journal 0, null. DOI : 10.1094/pbiomes-11-20-0079-r
Hily, J.M., Komar, V., Poulicard, N., Velt, A., Renault, L., Mustin, P., Vigne, E., Spilmont, A.S., and Lemaire, O. (2021). Evidence of differential spreading events of grapevine pinot Gris virus in Italy using datamining as a tool. Eur J Plant Pathol, 1-8. DOI : 10.1007/s10658-021-02343-3.
Hily J-M, Poulicard N, Kubina J, Reynard J-S, Spilmont A-S, Fuchs M, Lemaire O and Vigne E. (2021) Metagenomic analyses of nepoviruses: diversity, evolution and identification of a hitherto undescribed putative region for host range in subgroup A species. Arch Virol 166, 2789-2801. DOI : 10.1007/s00705-021-05111-0
Hommay G., Alliaume A., Reinbold C., Herrbach É. (2021). Transmission of Grapevine leafroll-associated virus-1 (Ampelovirus) and Grapevine virus A (Vitivirus) by the Cottony grape scale Pulvinaria vitis (Hemiptera: Coccidae). Viruses 13 (10), 2081; https://doi.org/10.3390/v13102081
Hommay G., Bichain J.M. (2021). Sur la présence en Alsace de deux espèces de limaces introduites : Deroceras invadens Reise, Hutchinson, Schunack & Schlitt, 2011 et Ambigolimax valentianus (Ferussac, 1821) (Gastropoda, Stylommatophora, Limacoidea). Bulletin de la Société d'Histoire naturelle et d'Ethnographie de Colmar 77 (7) : 64-69. https://www.museumcolmar.org/bulletin
Kastally C, Niskanen AK, Perry A, Kujala ST, Avia K, Cervantes S, Haapanen M, Kesälahti R, Kumpula TA, Mattila TM, Ojeda DI, Tyrmi JS, Wachowiak W, Cavers S, Kärkkäinen K, Savolainen O, Pyhäjärvi T. Taming the massive genome of Scots pine with PiSy50k, a new genotyping array for conifer research. Plant J. 2021 Dec 11. doi: 10.1111/tpj.15628. Epub ahead of print. PMID: 34897859. https://hal.inrae.fr/hal-03335067
Maillot P, Velt A, Rustenholz C, Butterlin G, Merdinoglu D and Duchêne E. (2021) Alternative splicing regulation appears to play a crucial role in grape berry development and is also potentially involved in adaptation responses to the environment. BMC Plant Biology. 21 : 487 https://doi.org/10.1186/s12870-021-03266-1
Isabelle R. Martin,Emmanuelle Vigne, Amandine Velt, Jean-Michel Hily, Shahinez Garcia, Raymonde Baltenweck, Véronique Komar, Camille Rustenholz, Philippe Hugueney, Olivier Lemaire and Corinne Schmitt -Keichinger (2021). Severe Stunting Symptoms upon Nepovirus Infection Are Reminiscent of a Chronic Hypersensitive-like Response in a Perennial Woody Fruit Crop. Viruses. DOI : https://doi.org/10.3390/v13112138
Jean E. Masson, Isabelle Soustre-Gacougnolle, Mireille Perrin, Carine Schmitt, Mélanie Henaux, Caroline Jaugey, Emma Teillet, Marc Lollier, Jean-François Lallemand, Frederic Schermesser & GIEE Westhalten. Transdisciplinary participatory-action-research from questions to actionable knowledge for sustainable viticulture development. Humanities and Social Sciences Communications volume 8, Article number: 24 (2021) https://doi.org/10.1057/s41599-020-00693-7
Mauger, S., Fouqueau, L., Avia, K., Reynes, L., Serrao, E. A., Neiva, J., & Valero, M. (2021). Development of tools to rapidly identify cryptic species and characterize their genetic diversity in different European kelp species. Journal of Applied Phycology, 33(6), 4169-4186. https://hal.sorbonne-universite.fr/hal-03375921
Péros JP, Cousins P, Launay A, Cubry P, Walker A, Prado E, Peressotti E, Wiedemann-Merdinoglu S, Laucou V, Merdinoglu D, This P, Boursiquot JM, Doligez A (2021). Genetic diversity and population structure in Vitis species illustrate phylogeographical patterns in eastern North America. Molecular Ecology, http://doi.org/10.1111/mec.15881.
Pelsy F, Bevilacqua L, Blanc S, & Merdinoglu D. (2021). A molecular marker set combining a retrotransposon insertion and SSR polymorphisms is useful for assessing diversity in Vitis. OENO One, 55(2), 403-414, https://doi.org/10.20870/oeno-one.2021.55.2.4473
Possamai T, Wiedemann-Merdinoglu S, Merdinoglu D, Migliaro D, De Mori G, Cipriani G, Velasco R, Testolin R. (2021). Construction of A High-Density Genetic Map And Detection of A Major QTL of Resistance To Powdery Mildew (Erysiphe Necator Sch.) In Caucasian Grapes (Vitis Vinifera L.). BMC Plant Biology, https://doi.org/10.21203/rs.3.rs- 439287/v1
Savoi S.; Arapitsas P.; Duchêne É.; Nikolantonaki M.; Ontañon I.; Carlin S.; Schwander F.; Gougeon R.D.; Ferreira A.C.S.; Theodoridis G.; et al. (2021). Grapevine and Wine Metabolomics-Based Guidelines for FAIR Data and Metadata Management. Metabolites, 11, 757. https:// doi.org/ 10.3390/metabo11110757
Then C, Bak A, Morisset A, Dader B, Ducousso M, Macia J-L, Drucker M 2021 The N-terminus of the cauliflower mosaic virus aphid transmission protein P2 is involved in transmission body formation and microtubule interaction. Virus Research, https:// doi.org/10.1016/j.virusres.2021.198356
Then C, Bellegarde F, Schivre G, Martinière A, Macia J-L, Xiong T C, Drucker M. Plant Viruses Can Alter Aphid-Triggered Calcium Elevations in Infected Leaves Cells 2021, 10(12), 3534; https://doi.org/10.3390/cells10123534
Yordanov, S., Drucker, M., Butt, H.-J. & Koynov, K. (2021) Real-time monitoring of biomechanical activity in aphids by laser speckle contrast imaging. Optics Express, 29, 28461–28480, https://doi.org/10.1364/OE.431989
